Detail



ID : Ahg496598

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496598|fgenesh2_kg.8__2414__AT5G64040.1
Sequence
ATCCTCATTC ATCGCTAATA CTAAAATCTG ATCTCTTCCT TCCTCACTCA CCAATCAAAC TCAAAAAAAC TCTTGAATTT TTCAAGAACA AAAGAAAAAG AGATCTTTAA TGGCGGCCAT GAACTCGAGT GTTCTCACTT GCAGCTACGC AATTGCTGGT TCTGGCTCAG TAGAGCTAAA CCAGAAAGTT GGTTTGGTGA ATTCATCAGT TGGGTTTGGT CAGAAGAAAC AGATGATTAT GCCTGTGATC AAAGCTCAAC GAGTTGTTGG TGATGATGTT GATGGATCTA ATGGAAGAAG ATCAGCCATG GTTTTCTTAG CAGCTACGCT CTTCTCCACT GCTGCTGTTT CTGCTTCTGC TAATGCTGGC GTCATCGATG AATACCTCGA GAGGAGCAAA GCCAACAAAG AACTTAATGA TAAGAAGAGA TTGGCAACAA GTGGAGCAAA CTTTGCGAGA GCATTCACTG TACAATTCGG AAGCTGCAAG TTCCCTGAGA ATTTCACTGG CTGCCAAGAT CTTGCCAAGC AAAAGAAAGT TCCATTTATC TCAGAAGATT TGGCTTTGGA ATGCGAAGGC AAGGACAAGT ACCAGTGTGG TTCCAATGTT TTCTGGAAAT GGTGAACAAC TTGTTTGTTT TCATCTATTC TTATATAAAT CCAACAATGT ATCTATATCT CTCTCTCTAT TCATGAAAGT TCTCGCATCC ATTTGAATCT ATCAAGTTAA AACTCTATTA AGAGATTAGG AAGCATTATT TTG 
Length763
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20007917.. 20008844
Download Sequence
A.thaliana
AGI-codeAT5G64040.2
Descriptionphotosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
TAIR curator summaryEncodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex.
Alias[PSAN]
Gene coexpression
MR
MR Locus Description
4 Ahg473640 photosystem I subunit F
5.09902 Ahg489877 light harvesting complex of photosystem II 5
5.47723 Ahg471781 light harvesting complex photosystem II subunit 6
7.74597 Ahg486922 light harvesting complex photosystem II
9.74679 Ahg951584 PS II oxygen-evolving complex 1
9.79796 Ahg470899 photosystem I subunit O
10.9087 Ahg486624 photosystem I light harvesting complex gene 2
11.225 Ahg470689 photosystem II subunit P-1
13.4164 Ahg474340 photosystem I subunit H2
14.2829 Ahg922093 photosystem I subunit K
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression